Implements naive csv reader / writer (#2)

This commit is contained in:
Romain Dorgueil
2016-12-28 12:27:23 +01:00
parent 96c9b55fec
commit e77fbae38b
3 changed files with 158 additions and 4 deletions

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@ -6,8 +6,7 @@ try:
except ImportError as e: except ImportError as e:
import logging import logging
logging.exception( logging.exception('You must install Jupyter to use the bonobo Jupyter extension. Easiest way is to install the '
'You must install Jupyter to use the bonobo Jupyter extension. Easiest way is to install the '
'optional "jupyter" dependencies with «pip install bonobo[jupyter]», but you can also install a ' 'optional "jupyter" dependencies with «pip install bonobo[jupyter]», but you can also install a '
'specific version by yourself.') 'specific version by yourself.')

90
bonobo/io/csv.py Normal file
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@ -0,0 +1,90 @@
import csv
from copy import copy
from .file import FileReader, FileWriter, FileHandler
class CsvHandler(FileHandler):
delimiter = ';'
quotechar = '"'
headers = None
class CsvReader(CsvHandler, FileReader):
"""
Reads a CSV and yield the values as dicts.
.. attribute:: delimiter
The CSV delimiter.
.. attribute:: quotechar
The CSV quote character.
.. attribute:: headers
The list of column names, if the CSV does not contain it as its first line.
.. attribute:: skip
The amount of lines to skip before it actually yield output.
"""
skip = 0
def __init__(self, path_or_buf, delimiter=None, quotechar=None, headers=None, skip=None):
super().__init__(path_or_buf)
self.delimiter = str(delimiter or self.delimiter)
self.quotechar = quotechar or self.quotechar
self.headers = headers or self.headers
self.skip = skip or self.skip
@property
def has_headers(self):
return bool(self.headers)
def read(self, ctx):
reader = csv.reader(ctx.file, delimiter=self.delimiter, quotechar=self.quotechar)
headers = self.has_headers and self.headers or next(reader)
field_count = len(headers)
if self.skip and self.skip > 0:
for i in range(0, self.skip):
next(reader)
for row in reader:
if len(row) != field_count:
raise ValueError('Got a line with %d fields, expecting %d.' % (
len(row),
field_count, ))
yield dict(zip(headers, row))
class CsvWriter(CsvHandler, FileWriter):
def __init__(self, path_or_buf, delimiter=None, quotechar=None, headers=None):
super().__init__(path_or_buf)
self.delimiter = str(delimiter or self.delimiter)
self.quotechar = quotechar or self.quotechar
self.headers = headers or self.headers
def initialize(self, ctx):
super().initialize(ctx)
ctx.writer = csv.writer(ctx.file, delimiter=self.delimiter, quotechar=self.quotechar)
ctx.headers = copy(self.headers)
ctx.first = True
def write(self, ctx, row):
if ctx.first:
ctx.headers = ctx.headers or row.keys()
ctx.writer.writerow(ctx.headers)
ctx.first = False
ctx.writer.writerow(row[header] for header in ctx.headers)
def finalize(self, ctx):
del ctx.headers, ctx.writer, ctx.first
super().finalize(ctx)

65
tests/io/test_csv.py Normal file
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@ -0,0 +1,65 @@
import pytest
from bonobo import Bag
from bonobo.core.contexts import ComponentExecutionContext
from bonobo.io.csv import CsvReader, CsvWriter
from bonobo.util.testing import CapturingComponentExecutionContext
from bonobo.util.tokens import BEGIN, END
def test_write_csv_to_file(tmpdir):
file = tmpdir.join('output.json')
writer = CsvWriter(str(file))
context = ComponentExecutionContext(writer, None)
context.initialize()
context.recv(BEGIN, Bag({'foo': 'bar'}), Bag({'foo': 'baz', 'ignore': 'this'}), END)
context.step()
context.step()
context.finalize()
assert file.read() == 'foo\nbar\nbaz\n'
with pytest.raises(AttributeError):
getattr(context, 'file')
def test_write_json_without_initializer_should_not_work(tmpdir):
file = tmpdir.join('output.json')
writer = CsvWriter(str(file))
context = ComponentExecutionContext(writer, None)
with pytest.raises(AttributeError):
writer(context, {'foo': 'bar'})
def test_read_csv_from_file(tmpdir):
file = tmpdir.join('input.csv')
file.write('a,b,c\na foo,b foo,c foo\na bar,b bar,c bar')
reader = CsvReader(str(file), delimiter=',')
context = CapturingComponentExecutionContext(reader, None)
context.initialize()
context.recv(BEGIN, Bag(), END)
context.step()
context.finalize()
assert len(context.send.mock_calls) == 2
args0, kwargs0 = context.send.call_args_list[0]
assert len(args0) == 1 and not len(kwargs0)
args1, kwargs1 = context.send.call_args_list[1]
assert len(args1) == 1 and not len(kwargs1)
assert args0[0].args[0] == {
'a': 'a foo',
'b': 'b foo',
'c': 'c foo',
}
assert args1[0].args[0] == {
'a': 'a bar',
'b': 'b bar',
'c': 'c bar',
}