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Fixed rate bounds

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Avoid extremely slow generations due to either
- Excessive mutations.
- Extreme selection probabilities, which make tournament selection struggle.
This commit is contained in:
SimpleArt
2020-12-09 10:34:34 -05:00
parent efcd571a9a
commit f94a7ec9a8
1 changed files with 29 additions and 18 deletions
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47
src/attributes.py
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@ -69,13 +69,13 @@ class Attributes:
percent_converged = 0.50,
chromosome_mutation_rate = 0.15,
gene_mutation_rate = 0.05,
adapt_rate = 0,
adapt_probability_rate = 0.15,
adapt_population_flag = False,
max_selection_probability = 0.99,
min_selection_probability = 0.01,
max_chromosome_mutation_rate = 0.20,
min_chromosome_mutation_rate = 0.01,
adapt_rate = 0.05,
adapt_probability_rate = 0.05,
adapt_population_flag = True,
max_selection_probability = 0.75,
min_selection_probability = 0.25,
max_chromosome_mutation_rate = None,
min_chromosome_mutation_rate = None,
max_gene_mutation_rate = None,
min_gene_mutation_rate = None,
dist = None,
@ -130,11 +130,11 @@ class Attributes:
# Bounds on probabilities when adapting
self.max_selection_probability = max_selection_probability
self.max_chromosome_mutation_rate = max_chromosome_mutation_rate
self.max_gene_mutation_rate = (gene_mutation_rate+1)/2 if (max_gene_mutation_rate is None) else max_gene_mutation_rate
self.min_selection_probability = min_selection_probability
self.min_chromosome_mutation_rate = min_chromosome_mutation_rate
self.min_gene_mutation_rate = gene_mutation_rate/2 if (min_gene_mutation_rate is None) else min_gene_mutation_rate
self.max_chromosome_mutation_rate = chromosome_mutation_rate if (max_chromosome_mutation_rate is None) else max_chromosome_mutation_rate
self.min_chromosome_mutation_rate = chromosome_mutation_rate if (min_chromosome_mutation_rate is None) else min_chromosome_mutation_rate
self.max_gene_mutation_rate = gene_mutation_rate if (max_gene_mutation_rate is None) else max_gene_mutation_rate
self.min_gene_mutation_rate = gene_mutation_rate if (min_gene_mutation_rate is None) else min_gene_mutation_rate
# Distance between two chromosomes
if dist is None:
@ -201,13 +201,24 @@ class Attributes:
self.crossover_individual_impl = Crossover_Methods.Individual.Permutation.ox1
self.mutation_individual_impl = Mutation_Methods.Individual.Permutation.swap_genes
self.dist = lambda chromosome_1, chromosome_2:\
sum(
1
for gene_1, gene_2
in zip(chromosome_1, chromosome_2)
if gene_1 == gene_2
)
# Count the number of gene pairs they have in common
def dist(chromosome_1, chromosome_2):
gene_list_1 = list(chromosome_1)
gene_list_2 = list(chromosome_2)
count = 0
for i in range(len(gene_list_1)-1):
for j in range(len(gene_list_2)-1):
if gene_list_1[i] == gene_list_2[j]:
if gene_list_1[i+1] == gene_list_2[j+1]:
count += 1
break
return count
self.dist = dist
# Getter and setters for all required varibles